Author Archives: SEMS

SEMS extended until July 2017

We are happy to announce that the SEMS project has been extended, and now runs until July 2017. During the remaining months, we will focus on improving our MOST tool for exploration of differences between versions of a model; and we will investigate how to measure differences between SED-ML files.  

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End of 2016, end of SEMS?

It has been an exciting year for us, with good old and brand new collaborations, exciting projects, research stays close by and far away… We are right in the middle of the 5th year of SEMS funding, meaning that the project will come to an end soon – we’re closing down on the 28th of […]

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de.NBI action at COMBINE 2015 tutorial

At this year’s COMBINE tutorial, a satellite to the ICSB 2015, we taught different tools and possibilities to prepare model-based results for publication in public repositories such as BioModels and PMR2. We also encouraged people to try out our own model management solutions, particularly BiVeS, MaSyMoS, M2CAT and CAT. The slides for the introductory talk […]

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CAT goes ICSB

We’ll be joining the COMBINE team at ICSB 2015 as tutors this year. During the COMBINE tutorial on modeling and simulation tools and standards, we’ll be giving a talk about the COMBINE Archive and the COMBINE Archive Web Tools. The talk will be followed by a hands-on session in the afternoon. Date: 25th November, 2015. […]

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SEMS group retreat 2015

We’re on a retreat in lovely Greifswald this week. Besides all the social and group building activities, we evaluate and discuss possibilities to provide metadata for computational models and COMBINE Archives. The idea is to harmonise current approaches to metadata annotation in SBML, CellML, COMBINE Archive, etc.  

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Registration to DCite is open

We are co-organising a workshop on Citeable data and Reproducible models, DCite, in September this year in Rostock-Warnemünde. The workshop brings together scientists who wish to learn about open science, open data, and how to make their research results reproducible. In the mornings, invited key note speakers will talk about programs and initiatives such as […]

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