We are happy to announce that most of our software is now available in our Maven Repository. To use our tools in your application just add the following to your list of repositories and Maven will automagically resolve dependencies.
Continue readingSEMS at the COMBINE 2013
As promised, the SEMS group will participate in the COMBINE meeting 2013!
Continue readingResearch visit at the IPK Gatersleben
We are happy to visit the group of Falk Schreiber at the IPK Gatersleben in June this year. The goal of our visit is to discuss the applicability of SBGN maps generated by Vanted for our model change visualisations in Budhat. Martin Scharm is invited to give a talk about version control for computational models. […]
Continue readingBudhat tutorial at the HARMONY 2013
Martin Scharm will give a tutorial on model version control at this year’s HARMONY meeting. His tutorial features a brief introduction to model repositories and current support for model versions; an overview of possible improvements; and finally an introduction to Budhat – our web-based tool for model version control. The tutorial is scheduled for Mon, […]
Continue readingSEMS at ISMB 2013
We will be participating at ISMB 2013 with two posters presenting our work.
Continue readingSEMS at the 7th International CellML Workshop
As we already mentioned Ron Henkel is currently in New Zealand and we are participating in the 7th International CellML Workshop on Waiheke Island.
Continue readingWorkshop on Semantic Systems Biology
We are co-organising this year’s ICBO Workshop on Semantic Systems Biology. The workshop is part of the Semantic Trilogy in Montreal, Canada, July 2013. Submission deadline: 15th of April 2013.
Continue readingSEMS at the IB2013
The SEMS group contributes to the this year’s International Symposium on Integrative Bioinformatics, 18th – 20th March 2013 in Gatersleben. Martin Scharm represents the SEMS group with two posters and a software demonstration. Our contributions in detail: Poster: Martin Scharm, Olaf Wolkenhauer, Dagmar Waltemath: Disentangling the Evolution of Computational Models. Poster: Dagmar Waltemath, Ron Henkel, […]
Continue readingSEMS members receive HERMES funding
Two members of the SEMS group have recently received HERMES travel grants from the University of Rostock to establish new collaborations.
Continue readingImproving the reuse of computational models through version control — read more in our new publication in Bioinformatics.
The peer-reviewed journal Oxford Bioinformatics has just accepted our latest paper on model version control! We would like to use this opportunity to thank everyone who supported us in this work. The online version of the paper is already available and can be accessed from the journal’s website. While the paper itself is, unfortunately, not […]
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